Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020429.1 Corchorus olitorius cultivar O-4 contig20462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6775

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
577--614
14
2.7
14
80
15
51
26
0
0
73
0.83
649--697
5
10.6
5
77
16
52
59
0
16
24
1.37
649--700
28
1.9
26
92
7
86
59
0
15
25
1.36
3235--3273
2
19.5
2
100
0
78
48
0
0
51
1.00
4382--4443
31
2.0
31
96
0
115
19
27
3
50
1.63
6661--6702
13
3.5
13
81
18
63
71
4
9
14
1.28
6660--6699
12
3.4
12
80
19
57
70
5
7
17
1.30
6661--6713
23
2.3
23
90
6
81
73
3
9
13
1.21

Tables:   1

The End!