Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020439.1 Corchorus olitorius cultivar O-4 contig20472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27385

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1952--2059
29
3.8
28
82
4
81
14
19
28
37
1.92
1936--2061
28
4.4
29
79
5
130
15
19
25
40
1.90
7345--7567
109
2.0
109
95
0
401
44
14
23
16
1.85
17702--17916
87
2.5
87
88
3
317
40
26
16
15
1.88
17702--17916
29
7.4
29
86
3
281
40
26
16
15
1.88
26526--26591
32
2.0
33
88
5
98
15
15
1
68
1.29

Tables:   1

The End!