Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020446.1 Corchorus olitorius cultivar O-4 contig20479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28132

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6140--6167
3
9.3
3
100
0
56
32
32
0
35
1.58
6926--6977
14
3.4
14
76
19
59
38
7
3
50
1.50
6926--6989
32
2.0
32
96
0
119
37
7
6
48
1.57
7158--7194
18
2.1
18
90
5
58
48
5
10
35
1.61
7385--7465
22
3.7
22
82
12
96
38
19
9
32
1.85
7385--7450
21
3.0
21
85
12
89
37
19
9
33
1.84
7542--7754
22
9.9
22
74
10
120
38
15
11
35
1.83
10167--10191
7
3.6
7
100
0
50
0
12
0
88
0.53
14116--14161
22
2.1
22
88
8
67
45
6
10
36
1.65
23249--23302
27
2.0
27
92
3
92
66
7
12
12
1.43

Tables:   1

The End!