Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020453.1 Corchorus olitorius cultivar O-4 contig20486, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32503

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8107--8201
36
2.6
36
96
0
172
32
33
9
24
1.87
14840--14884
18
2.5
17
89
7
63
13
24
40
22
1.90
16084--16116
15
2.2
15
94
0
57
30
51
0
18
1.46
26459--26509
23
2.3
24
87
12
74
39
5
1
52
1.37
28061--28209
3
50.3
3
93
5
259
68
0
0
31
0.90
28447--28531
29
3.0
28
79
16
111
51
12
8
27
1.68
32420--32481
32
1.9
32
83
0
79
35
14
14
35
1.87

Tables:   1

The End!