Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020464.1 Corchorus olitorius cultivar O-4 contig20497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25103

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1178--1251
31
2.6
29
76
10
80
17
25
14
41
1.88
2822--2868
22
2.1
22
84
0
58
31
6
2
59
1.34
12878--13239
183
2.0
184
87
2
532
25
22
16
35
1.95
22945--23056
39
2.9
39
92
2
174
50
23
5
21
1.69
23028--23167
75
1.9
75
98
0
271
37
20
8
32
1.83
24835--24874
19
2.1
19
86
9
55
55
17
15
12
1.70

Tables:   1

The End!