Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020469.1 Corchorus olitorius cultivar O-4 contig20502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23428

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1630--1667
18
2.1
19
90
5
60
5
31
0
63
1.17
3800--3905
26
3.9
26
76
8
88
37
24
14
23
1.92
13055--13089
15
2.3
15
95
0
61
14
0
22
62
1.31
17804--18468
125
5.3
125
90
0
1051
31
19
16
32
1.94
17804--18468
251
2.7
250
91
0
1069
31
19
16
32
1.94

Tables:   1

The End!