Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020476.1 Corchorus olitorius cultivar O-4 contig20509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41547

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2656--5014
723
3.3
723
95
0
4262
33
18
19
28
1.95
21274--21320
21
2.2
21
96
0
85
25
6
25
42
1.78
21295--21409
33
3.6
33
66
17
107
24
4
29
41
1.74
23513--23560
4
12.0
4
90
0
60
0
6
22
70
1.09
25661--25695
3
11.7
3
100
0
70
31
0
0
68
0.90
27258--27299
22
1.9
22
90
0
66
11
19
26
42
1.85
29960--29991
3
10.7
3
93
0
55
34
3
0
62
1.11
33369--33397
15
1.9
15
100
0
58
41
20
27
10
1.85
38369--38467
27
3.7
27
91
0
153
20
17
41
21
1.90

Tables:   1

The End!