Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020482.1 Corchorus olitorius cultivar O-4 contig20515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26358

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8202--8248
26
1.9
24
87
12
69
40
4
27
27
1.75
9333--9370
18
2.2
17
95
4
67
44
0
23
31
1.54
9337--9370
9
3.9
9
92
3
52
47
0
26
26
1.53
11112--11160
22
2.2
23
82
10
57
42
10
30
16
1.81
13792--13869
41
1.9
41
91
0
129
41
3
15
39
1.65
22190--22813
221
2.8
220
90
2
950
43
11
23
21
1.85
23042--23127
43
2.1
41
84
6
111
38
22
5
33
1.78
25500--25534
3
11.7
3
100
0
70
34
0
0
65
0.93
25546--25579
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!