Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020488.1 Corchorus olitorius cultivar O-4 contig20521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33794

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4254--4323
29
2.4
29
95
0
122
24
14
4
57
1.55
4502--4533
2
16.5
2
93
6
57
50
0
0
50
1.00
8589--8615
14
1.9
14
100
0
54
37
0
0
62
0.95
9283--9322
22
1.9
19
85
14
53
57
0
7
35
1.27
9674--9729
27
2.1
27
96
0
103
17
25
44
12
1.84
13902--14047
76
1.9
76
90
2
231
21
7
21
49
1.74
14462--14502
16
2.6
15
85
11
55
2
12
2
82
0.86
14467--14508
22
1.9
22
85
9
59
7
11
2
78
1.04
20833--20976
72
2.0
72
93
0
243
27
15
15
40
1.88
33201--33242
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!