Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020493.1 Corchorus olitorius cultivar O-4 contig20526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14756

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1636--1701
18
3.0
22
75
25
68
7
24
16
51
1.70
7153--7317
81
2.0
81
98
0
321
27
22
21
27
1.99
7307--7357
19
2.7
19
77
14
61
50
1
0
47
1.12
10712--10812
50
2.0
50
100
0
202
41
11
24
21
1.87
10895--10942
24
2.0
24
100
0
96
29
12
12
45
1.78
10954--10997
22
2.0
22
100
0
88
13
13
31
40
1.84
11793--11919
63
2.0
63
100
0
254
41
23
15
18
1.89
12158--12209
21
2.5
21
93
0
86
23
30
19
26
1.98
14415--14737
43
7.7
43
84
4
426
42
26
10
21
1.85
14415--14743
84
3.9
84
93
1
552
41
25
10
21
1.85

Tables:   1

The End!