Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020500.1 Corchorus olitorius cultivar O-4 contig20533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22586

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
591--633
21
2.0
21
100
0
86
27
9
44
18
1.80
3001--3095
47
2.0
47
100
0
190
29
10
33
26
1.90
10613--10722
55
2.0
55
90
0
175
27
4
21
46
1.71
12966--12996
14
2.2
14
94
0
53
58
0
22
19
1.40
14854--14895
2
21.0
2
100
0
84
50
0
0
50
1.00
19858--19931
27
2.7
27
87
0
103
28
18
29
22
1.98
21062--21511
30
14.9
30
88
2
609
20
13
18
47
1.81
21802--21829
5
5.6
5
100
0
56
17
0
0
82
0.68

Tables:   1

The End!