Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020509.1 Corchorus olitorius cultivar O-4 contig20542, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4823

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1072
154
6.9
153
87
2
1475
41
18
19
20
1.90
1--1072
463
2.3
461
87
2
1506
41
18
19
20
1.90
1--1070
309
3.5
308
90
1
1565
41
18
19
20
1.90
2621--2975
30
11.6
30
82
4
368
30
18
19
30
1.96
2823--2929
32
3.3
32
69
7
99
35
15
13
35
1.87
2733--3008
65
4.4
62
82
6
252
33
17
17
32
1.93

Tables:   1

The End!