Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020512.1 Corchorus olitorius cultivar O-4 contig20545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17593

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--109
2
13.0
2
100
0
52
50
0
0
50
1.00
1604--1633
14
2.1
14
100
0
60
63
0
20
16
1.31
1808--1883
40
1.9
40
97
0
143
32
39
3
23
1.73
3884--3924
18
2.2
19
91
4
66
41
7
2
48
1.44
4052--4121
33
2.2
32
84
5
88
38
17
18
25
1.92
8253--8309
21
2.7
21
72
0
60
43
14
33
8
1.76
14642--14668
10
2.7
10
100
0
54
33
37
0
29
1.58
15456--15495
15
2.6
16
88
4
55
15
10
12
62
1.54

Tables:   1

The End!