Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020525.1 Corchorus olitorius cultivar O-4 contig20558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20791

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--70
22
2.0
23
82
8
56
42
6
35
15
1.73
1277--1323
11
4.7
10
80
17
53
40
6
21
31
1.78
1288--1323
19
1.9
18
88
5
54
41
2
22
33
1.68
7031--7106
39
1.9
40
89
2
118
44
10
17
27
1.81
10727--10755
9
3.3
9
90
9
51
79
0
0
20
0.74
15169--15220
23
2.2
23
86
6
68
48
1
3
46
1.31
19400--19448
2
24.5
2
91
0
80
44
0
4
51
1.20

Tables:   1

The End!