Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020530.1 Corchorus olitorius cultivar O-4 contig20563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23589

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2762--3039
137
2.0
140
96
2
517
43
7
9
40
1.64
3166--3293
60
2.1
61
82
4
152
50
16
15
17
1.79
8166--8202
11
3.5
11
79
20
51
16
24
45
13
1.83
8162--8218
21
2.7
21
91
0
87
14
21
49
15
1.80
11386--11459
25
2.9
25
76
9
78
43
10
5
40
1.63
13854--14058
101
2.0
101
100
0
410
42
17
19
20
1.89
22532--22568
18
2.0
19
94
5
67
10
13
10
64
1.49
23252--23325
28
2.6
28
82
4
78
17
18
25
37
1.93

Tables:   1

The End!