Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020543.1 Corchorus olitorius cultivar O-4 contig20576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9189

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--756
35
15.3
35
76
9
392
18
21
19
40
1.91
217--737
105
4.9
104
76
11
464
18
21
19
40
1.92
212--737
70
7.4
69
77
9
454
18
21
19
40
1.92
263--731
180
2.6
174
79
10
538
18
21
20
39
1.92
473--756
106
2.7
105
84
4
349
18
19
19
41
1.90
1229--1516
30
9.6
30
90
0
414
20
14
19
45
1.84
1552--1675
30
4.1
30
88
2
160
22
14
18
44
1.86
2067--2147
27
2.9
28
82
10
103
17
14
20
46
1.83
2067--2142
29
2.7
30
86
8
97
15
14
22
47
1.82
2655--2687
13
2.6
13
95
4
59
12
24
0
63
1.28
8800--9189
40
9.7
39
84
6
334
32
18
27
21
1.96
8800--9189
80
4.9
80
86
1
458
32
18
27
21
1.96
8817--9189
121
3.1
118
86
3
469
31
19
27
21
1.97

Tables:   1

The End!