Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020547.1 Corchorus olitorius cultivar O-4 contig20580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14874

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192--359
27
6.3
27
80
2
169
36
23
19
20
1.95
191--359
53
3.2
53
74
4
151
37
23
19
20
1.94
192--359
80
2.1
80
96
0
309
36
23
19
20
1.95
10797--10887
45
2.0
44
97
2
173
35
4
0
60
1.17
11147--11221
38
1.9
39
83
2
98
16
32
32
20
1.94
14401--14436
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!