Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020549.1 Corchorus olitorius cultivar O-4 contig20582, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29433

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2324--2717
163
2.4
162
82
7
465
31
19
19
28
1.97
8708--8791
32
2.6
32
75
19
84
25
23
9
41
1.84
8774--8905
29
4.4
29
77
9
140
24
31
11
32
1.90
8736--8906
90
1.9
90
87
2
254
23
29
11
35
1.90
12239--12530
100
2.9
100
91
2
471
29
24
21
24
1.99
12691--12729
16
2.4
16
91
8
62
66
12
7
12
1.43
15594--15623
15
2.1
15
93
6
53
63
6
16
13
1.50
19638--19675
16
2.4
16
90
0
58
65
10
10
13
1.47
27966--28014
21
2.3
21
82
6
55
14
28
16
40
1.87
29139--29196
10
6.4
9
74
21
50
75
3
10
10
1.15
29153--29190
16
2.3
17
86
4
51
81
2
7
7
0.96

Tables:   1

The End!