Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020553.1 Corchorus olitorius cultivar O-4 contig20586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15063

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218--279
22
2.8
22
95
4
108
17
30
24
27
1.97
258--418
69
2.3
70
90
1
252
26
23
29
20
1.99
9436--9469
2
17.0
2
100
0
68
50
0
0
50
1.00
11772--11822
2
25.5
2
80
7
59
47
5
0
47
1.26
12039--12116
39
2.0
40
89
2
122
47
8
6
37
1.61
12229--12639
203
2.0
203
94
0
714
36
11
8
44
1.70
12650--12676
13
2.1
13
100
0
54
25
7
29
37
1.83

Tables:   1

The End!