Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020559.1 Corchorus olitorius cultivar O-4 contig20592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16408

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6391--6430
15
2.6
16
88
4
55
15
10
12
62
1.54
8563--8588
13
2.0
13
100
0
52
15
0
30
53
1.42
11412--11492
39
2.0
40
92
2
137
50
8
3
37
1.51
11607--12019
206
2.0
201
91
5
661
36
11
7
43
1.71
12535--12604
36
1.9
36
91
0
113
60
8
10
21
1.55
15497--15558
31
2.0
31
83
0
79
32
24
3
40
1.71
15597--15778
93
2.0
93
91
0
292
34
13
2
50
1.54

Tables:   1

The End!