Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020566.1 Corchorus olitorius cultivar O-4 contig20599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26321

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2257--2315
31
1.9
31
85
0
82
25
13
1
59
1.44
7782--7814
15
2.2
15
94
0
57
18
0
3
78
0.87
8875--8912
15
2.5
15
100
0
76
31
5
42
21
1.75
9327--9357
2
15.5
2
100
0
62
48
0
0
51
1.00
14723--14897
85
2.1
83
92
3
289
26
16
8
49
1.73
24957--25066
58
1.9
58
84
3
150
32
15
19
32
1.93

Tables:   1

The End!