Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020572.1 Corchorus olitorius cultivar O-4 contig20605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13669

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1334--1485
74
2.1
74
98
0
295
20
8
19
51
1.73
4549--5627
438
2.5
439
80
5
1100
42
13
14
29
1.83
5733--5906
89
2.0
89
96
0
321
25
13
8
51
1.70
7294--7350
21
2.7
21
94
0
105
14
50
3
31
1.59
8008--8075
27
2.5
27
92
4
102
19
14
47
19
1.83
8008--8064
27
2.1
27
100
0
114
19
14
45
21
1.85
8347--8388
20
2.1
20
90
0
66
54
0
7
38
1.28
10172--10210
20
2.0
20
89
0
60
12
2
17
66
1.35
12395--12437
16
3.2
13
81
18
52
67
2
2
27
1.15

Tables:   1

The End!