Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020573.1 Corchorus olitorius cultivar O-4 contig20606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28214

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--156
33
2.6
33
96
0
154
20
33
34
10
1.87
1713--1748
13
2.6
13
91
8
54
50
0
0
50
1.00
11598--11622
1
25.0
1
100
0
50
100
0
0
0
0.00
16216--16476
128
2.0
130
88
4
393
51
2
9
36
1.48
22051--22098
16
3.2
15
77
17
55
8
12
2
77
1.08
28150--28202
2
26.5
2
100
0
106
49
0
50
0
1.00

Tables:   1

The End!