Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020595.1 Corchorus olitorius cultivar O-4 contig20628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18202

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
265--380
37
3.1
37
93
0
196
3
40
42
13
1.61
300--360
18
3.3
18
71
13
61
3
42
42
11
1.57
4606--4641
16
2.1
18
90
10
58
27
5
0
66
1.13
14571--14614
22
2.0
22
95
0
79
27
0
11
61
1.30
14570--14614
12
3.9
12
85
11
67
26
0
11
62
1.29
16055--16108
22
2.3
22
81
9
63
38
31
14
14
1.87
17897--18152
132
1.9
132
95
0
460
50
2
10
37
1.49

Tables:   1

The End!