Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020597.1 Corchorus olitorius cultivar O-4 contig20630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3441

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--188
35
4.5
34
71
18
115
43
1
2
52
1.23
35--157
7
17.3
7
68
15
65
43
0
3
52
1.23
1742--1805
22
3.0
22
77
13
80
23
17
6
53
1.66
1763--1799
19
1.9
19
94
0
65
29
16
8
45
1.76
1884--2058
35
5.0
34
77
10
167
30
17
2
49
1.59
1886--2059
72
2.5
69
84
7
201
31
17
2
49
1.59
2660--2732
29
2.4
30
79
6
85
30
26
12
31
1.92
2660--2723
29
2.1
31
85
5
87
29
28
14
28
1.95
2825--2857
12
2.8
12
90
9
50
6
0
27
66
1.15
3031--3103
29
2.5
30
84
4
94
31
13
26
28
1.94
2984--3103
31
4.0
30
76
7
109
33
14
24
28
1.94

Tables:   1

The End!