Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020600.1 Corchorus olitorius cultivar O-4 contig20633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32868

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
208--237
10
3.0
10
100
0
60
30
0
20
50
1.49
1127--1275
51
2.9
51
80
2
156
36
19
6
36
1.78
3326--3361
17
2.1
17
89
0
54
30
11
19
38
1.86
3556--3599
18
2.4
18
85
14
72
29
45
13
11
1.79
3615--3683
18
3.8
18
74
0
75
17
28
26
27
1.97
5435--5470
17
2.1
17
89
0
54
30
11
19
38
1.86
6970--7006
14
2.6
14
95
0
65
40
0
21
37
1.54
7207--7248
18
2.3
19
91
4
68
52
4
7
35
1.50
7659--7687
11
2.6
11
100
0
58
20
17
20
41
1.90
17524--17556
12
2.6
13
90
4
50
78
3
15
3
0.99

Tables:   1

The End!