Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020603.1 Corchorus olitorius cultivar O-4 contig20636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3433

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--215
35
6.0
35
87
3
287
39
20
13
26
1.90
180--447
54
5.0
54
80
5
220
32
23
17
26
1.97
235--442
109
1.9
107
79
5
231
33
23
17
26
1.96
1247--1328
37
2.1
39
82
6
96
35
14
10
39
1.82
1942--1998
20
2.9
20
97
2
107
35
10
10
43
1.74
2646--2700
19
3.1
19
64
15
53
40
23
10
25
1.87
2462--3156
35
19.7
35
87
3
896
40
20
11
27
1.87
3131--3398
54
5.0
54
81
6
249
32
23
17
26
1.97
3186--3401
109
2.0
107
81
5
247
32
23
16
27
1.96

Tables:   1

The End!