Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020611.1 Corchorus olitorius cultivar O-4 contig20644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28359

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--284
25
4.0
24
67
18
63
42
26
14
15
1.86
196--235
21
2.0
20
85
14
55
47
30
7
15
1.72
250--297
25
1.9
25
83
8
62
41
31
12
14
1.83
400--519
60
2.0
60
100
0
240
48
16
21
13
1.80
2678--2706
2
14.5
2
100
0
58
51
0
0
48
1.00
5278--5329
21
2.5
21
77
0
59
38
9
13
38
1.77
22758--22821
24
2.7
24
76
9
76
23
14
31
31
1.94
22987--23046
24
2.5
23
84
12
77
13
8
13
65
1.48
23267--23503
27
9.0
26
77
10
230
20
27
27
23
1.99
23463--23545
41
2.0
40
84
6
105
24
22
28
24
1.99

Tables:   1

The End!