Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020613.1 Corchorus olitorius cultivar O-4 contig20646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13705

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176--255
29
2.7
29
86
3
97
41
12
17
28
1.86
954--1025
19
4.1
19
72
20
75
34
30
0
34
1.58
1581--1637
24
2.4
24
90
0
96
40
10
40
8
1.71
5938--5996
26
2.3
26
85
5
75
62
5
0
32
1.17
7254--7348
33
2.9
33
91
0
154
16
34
34
13
1.89
7874--7951
21
3.8
21
77
15
67
53
1
1
43
1.16
7879--7954
12
6.7
11
70
25
52
53
1
1
43
1.17
13307--13332
13
2.0
13
100
0
52
38
0
15
46
1.46

Tables:   1

The End!