Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020614.1 Corchorus olitorius cultivar O-4 contig20647, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35516

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--67
2
33.5
2
100
0
134
0
50
0
49
1.00
8114--8171
29
2.0
30
86
3
82
36
20
18
24
1.95
9373--9430
29
2.0
30
86
3
82
24
18
20
36
1.95
15027--15290
60
4.5
60
82
7
294
25
23
15
36
1.94
15027--15290
59
4.5
60
83
6
319
25
23
15
36
1.94
15029--15291
119
2.2
116
84
7
336
25
23
15
35
1.94
19705--19749
4
10.8
4
90
4
63
71
2
26
0
0.98
20930--21084
69
2.2
70
87
3
224
24
25
18
32
1.97
21195--21318
47
2.6
47
90
0
203
19
27
17
35
1.94
21401--21683
62
4.5
62
83
5
338
22
22
17
37
1.94
21670--21695
12
2.2
12
100
0
52
7
26
7
57
1.54
23609--23882
150
1.8
150
88
3
417
29
25
18
27
1.98
35193--35270
29
2.6
30
83
4
95
33
21
6
38
1.79

Tables:   1

The End!