Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020622.1 Corchorus olitorius cultivar O-4 contig20655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4525

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2550--3747
48
25.1
48
88
1
1734
43
21
22
12
1.86
3712--3829
41
2.9
40
87
3
166
37
21
23
17
1.94
3845--4144
44
6.8
41
76
14
228
33
17
28
22
1.96
3838--4010
94
1.8
94
87
4
260
32
16
27
23
1.95
3954--4144
42
4.4
42
80
10
217
34
16
27
21
1.95
3954--4144
41
4.4
42
78
10
192
34
16
27
21
1.95
3954--4144
87
2.2
84
85
8
242
34
16
27
21
1.95

Tables:   1

The End!