Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020625.1 Corchorus olitorius cultivar O-4 contig20658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10904

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1090--1144
27
2.0
28
92
3
94
50
1
3
43
1.30
1193--1363
32
5.3
32
81
5
193
29
19
24
26
1.99
3843--3874
15
2.1
15
94
0
55
75
9
3
12
1.16
4458--4505
23
2.0
24
92
4
80
33
14
6
45
1.70
4541--4582
2
21.0
2
100
0
84
50
0
0
50
1.00
6976--7031
24
2.4
23
84
3
67
48
0
1
50
1.11

Tables:   1

The End!