Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020641.1 Corchorus olitorius cultivar O-4 contig20674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11322

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
186--1087
40
23.4
39
81
10
528
37
10
20
31
1.86
253--1079
118
7.2
118
80
11
747
38
10
20
31
1.86
566--760
107
1.8
108
85
1
275
38
9
19
32
1.83
674--1080
79
5.2
78
91
4
622
38
8
20
31
1.84
1174--1624
145
3.1
144
92
3
722
33
16
21
28
1.94
2907--3009
6
17.2
6
92
7
165
0
1
16
81
0.78

Tables:   1

The End!