Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020642.1 Corchorus olitorius cultivar O-4 contig20675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41490

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2506--2714
52
3.9
52
82
5
258
33
16
14
35
1.89
2663--2783
41
3.1
39
80
11
131
33
15
13
37
1.87
5678--5710
16
2.1
16
94
0
57
39
0
15
45
1.46
6436--6494
23
2.6
22
78
7
73
22
13
3
61
1.47
9370--9425
25
2.3
24
93
3
94
39
17
17
25
1.92
9379--9425
12
3.8
12
91
2
76
40
14
19
25
1.90
11195--11257
13
5.0
13
94
3
103
38
15
22
23
1.93
11189--11257
25
2.8
25
86
8
104
37
17
20
24
1.93
11189--11257
12
5.6
12
93
3
102
37
17
20
24
1.93
23142--23171
1
30.0
1
100
0
60
0
0
0
100
0.00

Tables:   1

The End!