Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020643.1 Corchorus olitorius cultivar O-4 contig20676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15203

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2138--2213
29
2.7
28
93
4
134
31
7
11
48
1.68
3118--3151
16
2.1
16
100
0
68
17
29
29
23
1.97
3157--3198
22
1.9
22
85
0
57
23
23
19
33
1.97
3260--3303
22
2.0
22
100
0
88
27
18
13
40
1.88
11911--12008
30
3.4
30
66
16
89
14
23
20
41
1.89
11901--12015
56
2.1
56
100
0
230
16
22
19
41
1.90
13190--13383
2
97.0
2
100
0
388
0
0
50
50
1.00

Tables:   1

The End!