Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020646.1 Corchorus olitorius cultivar O-4 contig20679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10801

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6468--6514
14
3.5
13
80
13
60
87
8
4
0
0.67
6843--6881
5
7.8
5
91
8
62
82
0
15
2
0.79
8120--8172
25
2.3
23
78
15
63
26
20
15
37
1.92
7740--8439
140
4.9
141
88
5
963
29
20
15
34
1.93
8567--9073
40
12.8
40
83
5
618
32
21
9
37
1.85
9038--9099
28
2.2
28
82
2
79
29
25
8
37
1.85
9071--9204
39
3.4
39
86
3
169
28
22
11
37
1.90
9070--9220
39
3.8
39
83
6
126
27
22
13
36
1.91
9622--9692
24
3.0
24
100
0
142
21
12
11
54
1.68
9772--9825
18
3.2
18
67
32
55
11
24
20
44
1.83

Tables:   1

The End!