Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020660.1 Corchorus olitorius cultivar O-4 contig20693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8280

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--265
2
17.5
2
100
0
70
48
0
0
51
1.00
919--1105
31
6.1
31
82
1
180
19
24
22
33
1.97
2278--2517
81
3.0
82
80
3
247
24
27
14
34
1.94
4208--4250
17
2.6
16
78
10
50
37
20
20
20
1.95
4629--4889
131
2.0
131
91
0
423
39
9
2
48
1.49
6042--6172
42
3.0
44
88
6
212
38
21
6
34
1.78
7754--7778
13
1.9
13
100
0
50
12
0
40
48
1.40

Tables:   1

The End!