Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020680.1 Corchorus olitorius cultivar O-4 contig20713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20855

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2117--2733
316
2.0
316
97
0
1171
36
17
16
29
1.92
3337--3379
13
3.3
12
81
12
50
30
0
9
60
1.28
3337--3380
14
3.3
14
81
9
56
29
0
9
61
1.27
8212--8243
12
2.7
12
90
0
55
68
0
0
31
0.90
9755--9810
28
2.0
28
100
0
112
25
32
17
25
1.97
17590--17660
34
2.1
34
94
0
124
32
15
8
43
1.77
18770--18810
21
1.9
22
85
5
57
9
17
29
43
1.80
19873--20032
79
2.0
79
100
0
320
20
12
15
52
1.74

Tables:   1

The End!