Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020689.1 Corchorus olitorius cultivar O-4 contig20722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17112

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1318--1375
19
2.9
19
82
5
71
32
22
8
36
1.85
2962--3008
23
2.0
23
88
8
69
53
21
8
17
1.70
3020--3093
26
2.8
26
100
0
148
44
16
12
27
1.82
4519--4543
12
2.1
12
100
0
50
0
0
60
40
0.97
12592--13655
431
2.4
436
83
5
1279
43
12
13
30
1.81
14138--14199
31
2.0
31
90
6
99
29
20
6
43
1.77
14235--14419
93
2.0
93
92
0
307
32
12
2
51
1.53
15565--15595
16
1.9
16
93
0
53
9
9
32
48
1.69
14698--15714
508
2.0
507
94
0
1793
26
11
20
41
1.86
16483--16552
29
2.5
29
93
6
119
45
12
12
28
1.79

Tables:   1

The End!