Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020696.1 Corchorus olitorius cultivar O-4 contig20729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29046

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11370--11668
76
3.9
76
96
0
519
19
25
32
22
1.97
18539--19835
340
3.9
326
77
9
1150
34
14
14
37
1.86
20370--22325
326
5.9
325
76
9
1533
33
13
15
37
1.87
22340--22379
2
20.0
2
94
0
71
47
0
0
52
1.00
22377--22405
4
7.2
4
100
0
58
24
0
0
75
0.80
23192--23259
9
8.1
9
71
12
56
51
1
0
47
1.09
23192--23261
24
3.0
22
81
10
77
52
1
0
45
1.09
23163--23323
82
2.0
82
93
3
281
51
3
0
44
1.24
24578--24654
40
1.9
40
89
5
120
36
18
3
41
1.69
28373--28445
28
2.5
29
82
8
85
26
16
13
43
1.85
28390--28445
28
2.0
28
89
3
87
26
16
16
41
1.88
28584--28678
32
3.1
32
93
4
160
38
12
14
33
1.84
28720--28750
8
3.9
8
100
0
62
0
12
0
87
0.55

Tables:   1

The End!