Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020701.1 Corchorus olitorius cultivar O-4 contig20734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63556

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--32
2
16.0
2
100
0
64
50
0
0
50
1.00
1159--1201
1
43.0
1
80
0
50
9
0
90
0
0.45
1159--1200
6
6.6
7
94
5
56
9
0
90
0
0.45
1159--1198
19
2.2
19
91
8
66
10
0
90
0
0.47
5423--5594
85
2.0
85
95
0
308
42
16
8
31
1.79
23124--23224
35
2.9
35
98
0
193
46
10
24
17
1.80
36057--36129
27
2.6
28
80
4
85
41
21
15
21
1.90
36885--36931
19
2.5
20
83
13
64
53
2
2
42
1.25
39532--39571
14
2.9
14
84
0
53
55
0
5
40
1.22
56113--56172
25
2.4
25
86
5
86
46
11
21
20
1.82
56850--56896
24
2.0
24
82
0
58
72
0
10
17
1.12
58751--58952
98
2.1
98
84
0
260
25
20
18
34
1.96
61359--61468
58
1.9
58
84
3
150
30
13
19
36
1.90
62460--63054
297
2.0
297
91
2
964
23
16
17
42
1.88

Tables:   1

The End!