Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020709.1 Corchorus olitorius cultivar O-4 contig20742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9516

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
562--792
124
1.9
125
95
0
419
35
17
17
29
1.93
638--946
160
1.9
157
93
3
530
33
19
17
29
1.95
840--1042
96
2.1
96
94
1
356
35
18
14
31
1.91
2822--3152
127
2.6
125
96
3
612
33
18
18
29
1.95
3045--3248
96
2.1
97
93
2
351
35
17
15
31
1.91
5952--5999
23
2.1
23
100
0
96
27
8
27
37
1.85
7913--8082
31
5.6
30
68
8
121
32
18
20
28
1.96
7947--8046
29
3.4
29
72
10
103
32
17
21
30
1.95
7916--8079
60
2.7
60
94
0
283
32
18
20
28
1.96
8119--8286
31
5.6
30
69
16
132
26
19
20
33
1.96
8121--8282
60
2.7
60
96
1
290
25
19
20
34
1.96
8152--8251
29
3.4
28
70
17
87
28
21
18
33
1.96
9111--9158
23
2.1
23
96
0
87
27
6
27
39
1.80

Tables:   1

The End!