Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020713.1 Corchorus olitorius cultivar O-4 contig20746, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11795

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1191--1241
22
2.2
24
83
16
72
41
0
0
58
0.98
1191--1239
25
2.0
25
84
8
64
40
0
0
59
0.98
3638--3685
25
2.0
24
84
11
64
10
12
14
62
1.54
8787--8831
24
1.9
23
86
13
65
55
11
11
22
1.66
11758--11787
6
4.8
6
95
4
51
83
0
16
0
0.65

Tables:   1

The End!