Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020718.1 Corchorus olitorius cultivar O-4 contig20751, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16421

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9511--10279
324
2.3
323
80
7
818
36
15
13
33
1.87
11463--11487
12
2.1
12
100
0
50
40
16
20
24
1.91
11492--11516
13
1.9
13
100
0
50
32
8
20
40
1.81
11595--11653
22
2.7
21
76
7
64
42
0
1
55
1.09
11814--11858
21
2.1
21
83
0
54
35
11
40
13
1.80
14686--14755
36
1.9
36
91
0
113
21
10
8
60
1.55
15006--15075
36
1.9
36
91
0
113
21
10
8
60
1.55
14478--15812
320
4.0
320
75
12
1444
37
15
8
38
1.79
15699--15770
36
1.9
38
86
10
105
20
9
11
58
1.60

Tables:   1

The End!