Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020719.1 Corchorus olitorius cultivar O-4 contig20752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18531

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--694
6
7.7
6
93
6
71
48
0
14
36
1.44
6689--6733
21
2.2
20
92
4
72
44
53
2
0
1.13
10907--10961
27
2.2
24
83
9
65
56
3
0
40
1.17
11343--11439
45
2.2
45
84
1
124
38
19
5
37
1.74
12499--12554
7
7.6
7
76
23
53
0
19
0
80
0.71
12499--12556
19
3.1
19
80
14
75
0
20
0
79
0.74
17526--17558
17
1.9
17
93
0
57
18
12
45
24
1.83

Tables:   1

The End!