Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020740.1 Corchorus olitorius cultivar O-4 contig20773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11759

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2617--2699
30
3.0
27
84
10
121
50
3
3
42
1.37
3016--3140
54
2.3
54
86
8
175
58
8
2
31
1.40
7033--7130
48
2.0
48
90
0
151
50
12
11
26
1.73
11156--11191
18
2.0
19
89
10
58
27
8
19
44
1.79
11218--11264
20
2.3
20
89
7
69
29
2
14
53
1.53
11561--11627
33
2.0
33
100
0
134
23
2
26
46
1.67

Tables:   1

The End!