Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020743.1 Corchorus olitorius cultivar O-4 contig20776, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56069

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11573--11891
125
2.6
125
98
0
613
22
10
33
32
1.88
20286--20409
62
2.0
62
100
0
248
37
17
22
22
1.94
26917--26951
18
1.9
18
94
0
61
51
11
8
28
1.67
28331--28380
23
2.1
24
85
3
66
48
16
2
34
1.57
29326--29360
3
11.7
3
93
0
61
62
34
2
0
1.10
35371--35395
1
25.0
1
100
0
50
100
0
0
0
0.00
52530--52587
30
2.0
29
82
3
71
37
10
25
25
1.88
56040--56069
2
15.0
2
100
0
60
50
0
50
0
1.00

Tables:   1

The End!