Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020745.1 Corchorus olitorius cultivar O-4 contig20778, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17640

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4637--4801
60
2.8
60
81
5
199
35
16
18
29
1.93
4840--4956
60
2.0
60
89
0
180
32
18
16
32
1.93
4836--4968
60
2.2
60
86
0
176
32
21
15
31
1.94
5118--5232
60
1.9
62
94
3
207
46
9
10
33
1.71
5118--5246
60
2.1
62
89
5
199
46
10
9
34
1.70
13766--13813
9
5.0
9
83
14
60
33
41
0
25
1.55
13766--13813
21
2.5
18
86
10
60
33
41
0
25
1.55

Tables:   1

The End!