Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020747.1 Corchorus olitorius cultivar O-4 contig20780, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7874

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
237--1308
561
1.9
555
86
4
1471
33
13
15
37
1.87
3940--4719
320
2.4
323
82
5
885
33
15
15
35
1.89
3776--5650
890
2.1
877
91
3
3039
35
13
15
35
1.87
4830--5982
326
3.5
326
88
3
1536
34
14
16
34
1.89
5478--6543
570
1.9
561
84
5
1450
34
13
15
35
1.87

Tables:   1

The End!