Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020748.1 Corchorus olitorius cultivar O-4 contig20781, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47201

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1077--1129
5
11.4
5
76
15
60
62
0
16
20
1.33
8301--8337
19
1.9
19
94
0
65
45
13
24
16
1.83
18024--18066
2
21.5
2
100
0
86
0
48
0
51
1.00
30638--30676
18
2.2
18
86
4
53
33
7
28
30
1.85
33997--34036
20
2.0
20
100
0
80
25
25
20
30
1.99
41624--41692
36
1.9
36
96
0
129
27
17
7
47
1.73
43953--43979
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!